Abstract:
:Sweet potato mild mottle virus (SPMMV) is the type member of the genus Ipomovirus (family Potyviridae) and is only known to occur in East Africa. In Uganda, SPMMV is the third most prevalent virus infecting sweet potato. The sequence variability of SPMMV was studied by cloning and sequencing a 1.8-kb fragment representing the 3'-end of the genome of eight SPMMV isolates collected from different districts of Uganda. Sequence comparisons indicated 85.9-99.9% nucleotide sequence identity and 92.8-100% amino acid sequence similarity for the coat protein (CP) encoding region. The nucleotide sequence identity within the 3'-untranslated region (3' UTR) was 84.7-100%, and the region was variable in length (303-308 nucleotides) due to some deletions within the 5'-proximal part of the 3' UTR. Phylogenetic analysis of the CP amino acid sequences revealed significant clustering, indicating the existence of distinguishable sequence variants or strains. The low CP amino acid sequence similarity of SPMMV isolates with other characterised viruses of the family Potyviridae and the unusual putative proteolytic cleavage site at the NIb/CP junction further demonstrate SPMMV as a very distinct virus in the family Potyviridae.
journal_name
Arch Viroljournal_title
Archives of virologyauthors
Mukasa SB,Rubaihayo PR,Valkonen JPdoi
10.1007/s00705-002-0930-3keywords:
subject
Has Abstractpub_date
2003-03-01 00:00:00pages
487-96issue
3eissn
0304-8608issn
1432-8798journal_volume
148pub_type
杂志文章abstract::Enzootic bovine leukosis (EBL) is a malignant B-cell lymphoma of cattle caused by infection with bovine leukemia virus (BLV). It is defined by clonal and neoplastic expansion of BLV-infected B cells. Currently, multiple examinations are able to comprehensively diagnose this condition. Inverse polymerase chain reaction...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-020-04945-4
更新日期:2021-01-24 00:00:00
abstract::An active replication complex of citrus exocortis viroid (CEV) was isolated as a chromatin-enriched fraction of infected tomato leaf with CEV RNA synthesis activity. This activity was solubilised from the chromatin with ammonium sulphate, but not with sarkosyl. Nucleoprotein complexes in the soluble fraction which bou...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050650
更新日期:1999-01-01 00:00:00
abstract::Cucumber mosaic virus (CMV) is a three component isodiametric plant virus which is common worldwide and has an extremely wide host range. A pseudorecombinant was made, derived from the RNA3 component of the CMV-S strain, carrying the coat protein (CP) gene, and the RNA1,2 components of the CMV-D strain. This system de...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-003-0190-x
更新日期:2004-01-01 00:00:00
abstract::A comparison of 15 field isolates of grapevine leafroll-associated virus 5 (GLRaV-5) was conducted, based on the analysis of nucleotide sequences of two viral ORFs: the coat protein (CP) and the heat shock protein 90 homolog (HSP90h). After amplification and cloning, the population of viral sequences was analyzed for ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1371-2
更新日期:2012-09-01 00:00:00
abstract::Utilizing co-transfection of DNA from glycoprotein gB- strain of HSV1 and cloned fragments of several simian alpha-herpesviruses containing the UL26, UL27 (gB glycoprotein), and UL28 gene homologs, replication-competent recombinant viruses were produced. Genetic analysis of one HSV1/SA8 recombinant (HSV1/SgB) demonstr...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050114
更新日期:1997-01-01 00:00:00
abstract::Using random amplification and high-throughput sequencing technology a novel picornavirus with dicistronic genome organization and genetically related to canine picodicistrovirus (genus Dicipivirus, family Picornaviridae) was identified and characterized in Northern white-breasted hedgehogs. Hedgehog dicipivirus (hedg...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-017-3565-0
更新日期:2018-01-01 00:00:00
abstract::Poultry production is an important sector of agriculture in Sri Lanka; however, there is a lack of information regarding circulation of infectious bronchitis virus (IBV). RNA was extracted from chicken tissues, subjected to IBV S1 RT-PCR, and sequenced. Overall, 19 out of 34 (55.88 %) samples were IBV positive and con...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-2831-x
更新日期:2016-06-01 00:00:00
abstract::Non-nucleoside reverse transcriptase inhibitors (NNRTIs) act quite specifically on human immunodeficiency virus type 1 (HIV-1). In general, they are not effective on human immunodeficiency virus type 2 (HIV-2) or simian immunodeficiency virus (SIV). Only SIV strains from African green monkeys are sensitive to several ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050070003
更新日期:2000-01-01 00:00:00
abstract::The thymidine kinase (TK) of herpesviruses, in contrast to cellular TKs, phosphorylates a variety of substrates including antiherpetic nucleoside analogues. This study reports the identification and DNA sequence of the simian varicella virus (SVV) TK gene. A 32P-labeled varicella zoster virus (VZV) TK DNA probe hybrid...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01718587
更新日期:1996-01-01 00:00:00
abstract::Human cytomegalovirus (HCMV) has evolved several immune-evasion strategies. One strategy involves encoding Fcgamma receptor (FcγR)-like proteins that thwart the Fcγ-mediated effector functions. Our aim was to determine whether GM allotypes-immunoglobulin γ chain determinants expressed primarily on the Fc segment-modul...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-011-0937-8
更新日期:2011-05-01 00:00:00
abstract::The nucleotide sequences of the SH gene of 45 new mumps virus isolates derived from different parts of Europe, Canada and USA were determined. A phylogenetic tree was constructed which confirmed the existence of three major clusters. While clustering according to geographical origin was clear in some cases each of the...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050073
更新日期:1997-01-01 00:00:00
abstract::Two hundred forty million people are chronically infected with hepatitis B virus (HBV) worldwide. The rise of globalization has facilitated the emergence of novel HBV recombinants and genotypes. We evaluated HBV genotypes and recombinants, mutations associated with resistance to antivirals (AVs), progression of hepati...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-3122-2
更新日期:2017-02-01 00:00:00
abstract::Here, we report a novel member of the genus Polerovirus, zucchini aphid-borne yellows virus (ZABYV), which was identified in zucchini grown for seed production in the Xinjiang Uygur Autonomous Region, China. The complete nucleotide sequence of the ZABYV genome was determined and found to be 5,792 nucleotides in length...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-019-04217-w
更新日期:2019-08-01 00:00:00
abstract::Grapevine Pinot gris virus (GPGV), a member of the genus Trichovirus in the family Betaflexiviridae, was recently discovered in Italy and subsequently in other European countries and in Korea. In this study, we assessed the occurrence of GPGV in 441 samples from Western and Eastern Europe collected over the period 200...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-015-2718-2
更新日期:2016-03-01 00:00:00
abstract::Many distinct polyomaviruses infecting a variety of vertebrate hosts have recently been discovered, and their complete genome sequence could often be determined. To accommodate this fast-growing diversity, the International Committee on Taxonomy of Viruses (ICTV) Polyomaviridae Study Group designed a host- and sequenc...
journal_title:Archives of virology
pub_type: 新闻
doi:10.1007/s00705-016-2794-y
更新日期:2016-06-01 00:00:00
abstract::Virus-like particles (VLP), morphologically similar to togavirus particles, were detected in the sera of chimpanzees and humans with chronic non-A, non-B (NANB) hepatitis. Particles resembling the virus were also found in the cytoplasm of hepatocytes obtained from NANB hepatitis infected chimpanzees. Furthermore, two ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01315557
更新日期:1989-01-01 00:00:00
abstract::The stability of regions containing tandemly reiterated sequences in the S component of the herpes simplex virus type 1 (HSV-1) genome was determined, by comparing restriction fragments of the regions among sets of HSV-1 isolates derived from a single source. The 6 reiterations examined were grouped into three. Reiter...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01313958
更新日期:1989-01-01 00:00:00
abstract::Amino acids Lys34, His36, and Phe37 were substituted by PCR-mediated, site-directed mutagenesis for three Trp's in the AcNPV polyhedrin sequence. Phase contrast microscopy revealed refringent, amorphous polyhedra in the nuclei of infected cells. Electron microscopy confirmed a great variation in form and size of the m...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050675
更新日期:2000-01-01 00:00:00
abstract::The RNA binding properties of the prunus necrotic ringspot virus (PNRSV) coat protein (CP) were demonstrated by northwestern and dot-blot analyses. The capability to bind PNRSV RNA 4 was compared with viruses representing three different interactions prevailing in the assembly and architecture of virions. The results ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050545
更新日期:1999-01-01 00:00:00
abstract::Nucleotide sequences of complete or partial coat protein (CP) genes were determined for 11 isolates of pea seed-borne mosaic virus (PSbMV) from Australia and one from China, and compared with known sequences of 20 other isolates. On phylogenetic analysis, the isolates from Australia and China grouped into 2 of 3 clade...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-011-1002-3
更新日期:2011-07-01 00:00:00
abstract::Cocksfoot mottle sobemovirus (CfMV) has a monopartite single-stranded positive-sense RNA genome. In wheat germ extract, in vitro translation of CfMV virion RNA resulted in the production of four major proteins of 100, 71, 34 and 12 kDa. In this paper we show the individual genes from which these polypeptides are synth...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050610
更新日期:1999-01-01 00:00:00
abstract::Optimal conditions of radial haemolysis in gel (HIG) with Chikungunya (Chik) and Japanese encephalitis (JE) viruses were developed and compared with those of rubella virus. Sheep erythrocytes were found preferable for HIG with Chik and JE viruses, unlike rubella virus, where goose erythrocytes gave best results. Roost...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01320619
更新日期:1980-01-01 00:00:00
abstract::The complete genomes of tobamovirus isolates from Plantago major L. from New Zealand (NZ-439), Plantago sp. from Germany (Kons 1105), Actinidia chinensis (Actinidia-AC) and A. deliciosa (Actinidia-AD) from China were sequenced and compared to previously published tobamovirus genomes. Their genome organization and phyl...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1292-0
更新日期:2012-07-01 00:00:00
abstract::Vanilla necrosis potyvirus (VNV) is the cause of significant losses to the South Pacific islands vanilla crop. The gene for the coat protein of VNV has been cloned and sequenced. Comparison of this gene with other potyviral coat protein sequences revealed 97% nucleotide sequence homology (98% amino acid homology) to a...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01316887
更新日期:1993-01-01 00:00:00
abstract::Human respiratory syncytial virus (RSV) is recognized as a leading pathogen responsible for severe respiratory infections in the pediatric population, particularly in infants and young children. A previous study by the same study group revealed that the RSV BA strain was prevalent in southwestern China in epidemic sea...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1552-z
更新日期:2013-07-01 00:00:00
abstract::We constructed three sub-genomic replicons of Tick-borne encephalitis virus (TBEV) (Oshima REP, Oshima REP-GFP and Oshima REP-Neo) by deleting genes coding for structural proteins without or with insertion of green fluorescent protein (GFP) or Neo genes, respectively. BHK cells transfected with Oshima REP expressed th...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-003-0262-y
更新日期:2004-06-01 00:00:00
abstract::Swine influenza (SI) is an acute respiratory disease of pigs, caused by swine influenza virus (SIV). Little is known about the inflammatory response in the lung during acute SI and its correlation with clinical signs or lung pathology. Moreover, until now there has been a limited amount of data available on the relati...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-014-2116-1
更新日期:2014-10-01 00:00:00
abstract::A hemagglutinating virus (8KS0813) was isolated from a red-necked stint. Hemagglutination inhibition and neutralization tests indicated that 8KS0813 was antigenically related to a prototype strain, APMV-6/duck/Hong Kong/18/199/77, but with an 8- and 16-fold difference, respectively, in their titers. The full genome se...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-014-2162-8
更新日期:2014-11-01 00:00:00
abstract::The present study was conducted to identify avian reovirus (ARV) proteins that can activate the phosphatidylinositol 3-kinase (PI3K)-dependent Akt pathway. Based on ARV protein amino acid sequence analysis, σA, σNS, μA, μB and μNS were identified as putative proteins capable of mediating PI3K/Akt pathway activation. T...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-2908-6
更新日期:2016-08-01 00:00:00
abstract::Antisera from dengue patients and dengue virus infected rabbits recognized octapeptides corresponding to linear amino acid sequences in the envelope protein of dengue 2 (Jamaica 1409). Although no peptide was recognized by sera from all dengue infected hosts, two peptides (216LPLPWLPG223 and 448FSGVSWTM455) were recog...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01311358
更新日期:1989-01-01 00:00:00