Taxonomic position of sugarcane streak mosaic virus in the family Potyviridae.

Abstract:

:AcDNA library was generated from purified RNA of sugarcane streak mosaic virus--Andhra Pradesh (SCSMV-AP). Two overlapping clones covering 3160 nucleotides encoding partial CI, complete 6K2, VPg-NIa and NIb genes were sequenced. A comparison of this sequence along with the 3' terminal 1315 nucleotides of SCSMV-AP determined earlier with the other members of the family Potyviridae indicated that it had only 30% identity at the amino acid level for the partial polyprotein open reading frame (ORF) with the members of Ipomovirus and Tritimovirus genera. Further, in the most conserved NIb region also there was only 40% identity with the type members of these genera. Based on this analysis, we suggest the taxonomic affiliation of SCSMV-AP into an undescribed new genus in the family Potyviridae.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Hema M,Sreenivasulu P,Savithri HS

doi

10.1007/s00705-002-0851-1

keywords:

subject

Has Abstract

pub_date

2002-10-01 00:00:00

pages

1997-2007

issue

10

eissn

0304-8608

issn

1432-8798

journal_volume

147

pub_type

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