Effects of Agricultural Chemicals on DNA Sequence Diversity of Soil Microbial Community: A Study with RAPD Marker.

abstract：:Rates of leaf litter decomposition in streams are strongly influenced both by inorganic nutrients dissolved in stream water and by litter traits such as lignin, nitrogen (N) and phosphorus (P) concentrations. As a result, decomposition rates of different leaf species can show contrasting responses to stream nutrient e...

journal_title：Microbial ecology

authors： Jabiol J,Lecerf A,Lamothe S,Gessner MO,Chauvet E

更新日期：2019-05-01 00:00:00

abstract：:Selective nucleic acid intercalating dyes--ethidium monoazide (EMA) and propidium monoazide (PMA)--represent one of the most successful recent approaches to detect viable cells (as defined by an intact cell membrane) by PCR and have been effectively evaluated in different microorganisms. However, some practical limita...

journal_title：Microbial ecology

authors： Fittipaldi M,Codony F,Adrados B,Camper AK,Morató J

更新日期：2011-01-01 00:00:00

abstract：:A temporal temperature gradient gel electrophoresis (TTGE) method was developed to determine the diversity of methanogen populations in the rumen. Tests with amplicons from genomic DNA from 12 cultured methanogens showed single bands for all strains, with only two showing apparently comigrating bands. Fingerprints of ...

journal_title：Microbial ecology

authors： Nicholson MJ,Evans PN,Joblin KN

更新日期：2007-07-01 00:00:00

abstract：:For the soil nitrogen-fixing bacterium Azospirillum brasilense, the ability to reduce [AuCl4](-) and to form gold nanoparticles (GNPs) has been demonstrated, with the appearance of a mauve tint of the culture. To validate the shapes and chemical nature of nanoparticles, transmission electron microscopy (TEM) and X-ray...

journal_title：Microbial ecology

authors： Tugarova AV,Burov AM,Burashnikova MM,Kamnev AA

更新日期：2014-01-01 00:00:00

abstract：:Alcohol production from corn is gaining importance in Ontario, Canada, and elsewhere. A major cost of corn production is the cost of chemical fertilizers and these continue to increase in price. The competitiveness of alcohol with fossil fuels depends on access to low-cost corn that allows growers to earn a sustainabl...

journal_title：Microbial ecology

authors： Mehnaz S,Lazarovits G

更新日期：2006-04-01 00:00:00

abstract：:The River Warnow is the drinking water source for the city of Rostock. Its eutrophic status is accompanied by high amounts of bacteria, which may reach up to 24 x 10(6) cells mL(-1) as recorded during a seasonal study in 2002. Because the river is eutrophic and also heavily loaded with organic matter, this burden is a...

journal_title：Microbial ecology

authors： Freese HM,Karsten U,Schumann R

更新日期：2006-01-01 00:00:00

abstract：:The genus Prochlorococcus is globally abundant and dominates the total phytoplankton biomass and production in the oligotrophic ocean. The single species, Prochlorococcus marinus, comprises six named ecotypes. Our aim was to analyze the taxonomic structure of the genus Prochlorococcus. We analyzed the complete genomes...

journal_title：Microbial ecology

authors： Thompson CC,Silva GG,Vieira NM,Edwards R,Vicente AC,Thompson FL

更新日期：2013-11-01 00:00:00

abstract：:Environmental pollution by plastic debris is estimated on a scale of 100 million metric tons, a portion of which is fragmented into micro- and nanoplastics. These fragments are often colonized by bacterial species in marine environments, possibly contributing to the biodegradation of such materials. However, further i...

journal_title：Microbial ecology

authors： Oliveira MM,Proenca AM,Moreira-Silva E,de Castro AM,Dos Santos FM,Marconatto L,Medina-Silva R

更新日期：2021-01-03 00:00:00

abstract：:The use of microbial inoculants containing plant growth-promoting rhizobacteria as a promoter of plant fitness and health is becoming increasingly popular in agriculture. However, whether and how these bacteria affect indigenous bacterial communities in field conditions is sparsely explored. We studied the effects of ...

journal_title：Microbial ecology

authors： Gadhave KR,Devlin PF,Ebertz A,Ross A,Gange AC

更新日期：2018-10-01 00:00:00

abstract：:Saltmarshes are typically dominated by perennial grasses with large underground rhizome systems that can change local sediment conditions and be important in shaping the sediment microbial community. Factors such as salinity that control plant zonation in saltmarshes are also likely to influence the microbial communit...

journal_title：Microbial ecology

authors： Rietl AJ,Overlander ME,Nyman AJ,Jackson CR

更新日期：2016-02-01 00:00:00

abstract：:The abundance and biomass of heterotrophic flagellates were estimated monthly in sediments of Botany Bay during March 1999-February 2000. The annual abundance and biomass were in the ranges of 0.46-4.70 x 10(5) cells/cm(3) and of 0.30-8.61 micro g C/cm(3), respectively. The majority of heterotrophic flagellates (93-10...

journal_title：Microbial ecology

authors： Lee WJ,Patterson DJ

更新日期：2002-05-01 00:00:00

abstract：:More than 50% of all anthropogenic N2O emissions come from the soil. Drained Histosols that are used for agricultural purposes are particularly potent sources of denitrification due to higher stocks of organic matter and fertiliser application. However, conditions that favour denitrification can vary considerably acro...

journal_title：Microbial ecology

authors： Schulz S,Kölbl A,Ebli M,Buegger F,Schloter M,Fiedler S

更新日期：2017-11-01 00:00:00

abstract：:Electron transport system (ETS) activity was measured in amended and nonamended soil by measuring the reduction of 2-(p-iodophenyl)-3-(p-nitrophenyl)-5-phenyl tetrazolium chloride (INT) to iodonitrotetrazolium formazan (INT-formazan), which can be easily extracted with methanol without interference from other compound...

journal_title：Microbial ecology

authors： Trevors JT,Mayfield CI,Inniss WE

更新日期：1982-10-01 00:00:00

abstract：:The 16S rDNA genes of an apparently pure culture of a psychrophilic and strict barophilic bacterium (WHB 46) were studied by PCR-mediated amplification and cloning into phage M13 mp18. Sequence analysis of five individual clones revealed the presence of two different 16S rDNA types. The homology value of 90% indicates...

journal_title：Microbial ecology

authors： Liesack W,Weyland H,Stackebrandt E

更新日期：1991-12-01 00:00:00

abstract：:Bacteria and algae release exopolymeric substances (EPS) that perform a wide range of important functions in aquatic and terrestrial systems. In this study we measured EPS in sediments at nine littoral sites around a shallow oligotrophic basin, and tested whether the concentration and composition of EPS was related to...

journal_title：Microbial ecology

authors： Hirst CN,Cyr H,Jordan IA

更新日期：2003-07-01 00:00:00

abstract：:To investigate growth of heterotrophic biofilm bacteria, a model biofilm reactor was developed to simulate a drinking water distribution system. Controlled addition of three different carbon sources (amino acids, carbohydrates, and humics) at three different concentrations (500, 1,000, and 2,000 ppb carbon) in the pre...

journal_title：Microbial ecology

authors： Ellis BD,Butterfield P,Jones WL,McFeters GA,Camper AK

更新日期：1999-11-01 00:00:00

abstract：:Freshwater wetlands constitute important ecosystems, and their benthic, attached microbial communities, including biofilms, represent key habitats that contribute to primary productivity, nutrient cycling, and substrate stabilization. In many wetland biofilms, algae constitute significant parts of the microbial popula...

journal_title：Microbial ecology

authors： Domozych DS,Domozych CR

更新日期：2008-01-01 00:00:00

abstract：:Carnivorous pitcher plants Sarracenia purpurea host diverse eukaryotic and bacterial communities which aid in insect prey digestion, but little is known about the functional processes mediated by the microbial communities. This study aimed to connect pitcher community diversity with functional nutrient transformation ...

journal_title：Microbial ecology

authors： Young EB,Sielicki J,Grothjan JJ

更新日期：2018-11-01 00:00:00

abstract：:We demonstrated previously that Cr(VI) is readily reduced to oxoCr(V)-diols at the surface of Arthrobacter oxydans-a Gram-positive aerobic bacteria isolated from Columbia basalt rocks originated from a highly contaminated site in the USA. Here, we report an electron spin resonance (ESR) study of Cr(III) hydroxide form...

journal_title：Microbial ecology

authors： Tsibakhashvili NY,Kalabegishvili TL,Rcheulishvili AN,Murusidze IG,Rcheulishvili OA,Kerkenjia SM,Holman HY

更新日期：2009-02-01 00:00:00

abstract：:Understanding the pathogenic potential of a new pathogen strain or a known pathogen in a new locale is crucial for management of disease in both wild and farmed animals. The Ostreid herpesvirus-1 (OsHV-1), a known pathogen of early-life-stage Pacific oysters, Crassostrea gigas, has been associated with mortalities of ...

journal_title：Microbial ecology

authors： Burge CA,Friedman CS

更新日期：2012-04-01 00:00:00

abstract：:We studied the persistence of Bacillus thuringiensis serovar israelensis (Bti) in a typical breeding site of the mosquito Ochlerotatus caspius in a particularly sensitive salt marsh ecosystem following two Bti-based larvicidal applications (Vectobac 12AS, 1.95 L/ha). The treated area was composed of four larval biotop...

journal_title：Microbial ecology

authors： Hajaij M,Carron A,Deleuze J,Gaven B,Setier-Rio ML,Vigo G,Thiéry I,Nielsen-LeRoux C,Lagneau C

更新日期：2005-11-01 00:00:00

abstract：:Viable bacteria were found in permafrost core samples from the Kolyma-Indigirka lowland of northeast Siberia. The samples were obtained at different depths; the deepest was about 3 million years old. The average temperature of the permafrost is -10 degrees C. Twenty-nine bacterial isolates were characterized by 16S rD...

journal_title：Microbial ecology

authors： Shi T,Reeves RH,Gilichinsky DA,Friedmann EI

更新日期：1997-05-01 00:00:00

abstract：:Interactions between mushrooms, yeasts, and parasitic fungi are probably common in nature, but are rarely described. Bolete fruiting bodies are associated with a broad spectrum of microorganisms including yeasts, and they are commonly infected with filamentous mycoparasites of the genus Sepedonium (teleomorph Hypomyce...

journal_title：Microbial ecology

authors： Yurkov A,Krüger D,Begerow D,Arnold N,Tarkka MT

更新日期：2012-02-01 00:00:00

abstract：:To reveal the variation of microbial community functions during water filtration process in river sediments, which has been utilized widely in natural water treatment systems, this study investigates the influence of municipal wastewater discharge to streams on the phylotype and metabolic potential of the microbiome i...

journal_title：Microbial ecology

authors： Li D,Sharp JO,Drewes JE

更新日期：2016-01-01 00:00:00

abstract：:Ammonia oxidation has been intensively studied for its sensitivity to environmental shifts and stresses. However, acute stress effects on the occurrence and composition of ammonia oxidizing bacteria (AOB) and archaea (AOA) based on expression of related molecular markers in complex soil environments have been to an ex...

journal_title：Microbial ecology

authors： Vasileiadis S,Coppolecchia D,Puglisi E,Balloi A,Mapelli F,Hamon RE,Daffonchio D,Trevisan M

更新日期：2012-11-01 00:00:00

abstract：:One of the major challenges in microbial ecology for the future is to establish links between structural and functional biodiversity. This is particularly difficult when one is interested in a phylogenetically diversified function such as denitrification. The data banks are very rich in functional gene sequences (nirS...

journal_title：Microbial ecology

authors： Goregues CM,Michotey VD,Bonin PC

更新日期：2005-02-01 00:00:00

abstract：:Deep sequencing of prokaryotic 16S rDNA regularly reveals thousands of microbial species thriving in many common habitats. It is still unknown how this huge microbial diversity, including many potentially competing organisms, may persist at a single site. One of plausible hypotheses is that a large number of spatially...

journal_title：Microbial ecology

authors： Falteisek L,Duchoslav V,Čepička I

更新日期：2016-07-01 00:00:00

abstract：:Incorporation of [(14)C]leucine into proteins of bacteria was studied in a temperate mesohumic lake. The maximum incorporation of [(14)C] leucine was reached at a concentration of 30 nM determined in dilution cultures. Growth experiments were used to estimate factors for converting leucine incorporation to bacterial c...

journal_title：Microbial ecology

authors： Tulonen T

更新日期：1993-11-01 00:00:00

abstract：:The original article contained mistakes in the authors' affiliations. ...

journal_title：Microbial ecology

authors： Torralba MG,Aleti G,Li W,Moncera KJ,Lin YH,Yu Y,Masternak MM,Golusinski W,Golusinski P,Lamperska K,Edlund A,Freire M,Nelson KE

更新日期：2020-11-20 00:00:00

abstract：:Marine sponges often harbor photosynthetic symbionts that may enhance host metabolism and ecological success, yet little is known about the factors that structure the diversity, specificity, and nature of these relationships. Here, we characterized the cyanobacterial symbionts in two congeneric and sympatric host spon...

journal_title：Microbial ecology

authors： Erwin PM,López-Legentil S,Turon X

更新日期：2012-10-01 00:00:00