Intraspecific genetic variation of striped red mullet (Mullus surmuletus L.) in the mediterranean sea assessed by allozyme and random amplified polymorphic DNA (RAPD) analysis

Abstract:

:Allozyme analysis on 20 putative enzyme-coding loci and RAPD analysis on 154 markers, amplified by eight decamer random primers, were used to assess the genetic variation of striped red mullet, Mullus surmuletus L., collected from six locations in the Mediterranean Sea. Both methods were able to detect a high degree of genetic polymorphism. For both methods, estimates of variance of allele frequencies (FST), and chi2 analyses, revealed significant differences (P < 0.05) among samples. Nei's genetic distance (D) among samples was low (mean D=0.011 for allozymes; mean D=0.018 for RAPDs) with data from both approaches revealing the sample from France to be most distinct from the Greek samples. Nevertheless, although most of the genetic variation in allozymes was not correlated with geographical distance, a correlation between genetic affinities and geographical area was found with RAPDs. It seems therefore that the RAPD method showed a more pronounced effect of isolation-by-distance in comparison with allozymes, probably because of the different number of markers of the red mullet genome examined with each method. Overall, the RAPD technique can be introduced as a complementary tool in the population genetics of marine fishes, providing supplementary information in their genetic stock structure analysis.

journal_name

Heredity (Edinb)

journal_title

Heredity

authors

Mamuris Z,Stamatis C,Triantaphyllidis C

doi

10.1038/sj.hdy.6885400

keywords:

subject

Has Abstract

pub_date

1999-07-01 00:00:00

pages

30-8

eissn

0018-067X

issn

1365-2540

pii

her540

journal_volume

83 (Pt 1)

pub_type

杂志文章

相关文献

HEREDITY文献大全
  • Postcopulatory, prezygotic isolation: intraspecific and interspecific sperm precedence in Tribolium spp., flour beetles.

    abstract::We investigated intraspecific and interspecific patterns of paternity in Tribolium castaneum, the flour beetle, by mating females either to pairs of conspecific males or to one conspecific and one heterospecific male of the closely related species, T. freemani. Females of both species store sperm in the spermatheca af...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1994.114

    authors: Robinson T,Johnson NA,Wade MJ

    更新日期:1994-08-01 00:00:00

  • Do polymorphic loci require large sample sizes to estimate genetic distances?

    abstract::The coefficient of variation of estimates of three genetic distances (standard genetic distance of Nei, chord distance, FST) was examined with computer simulation to determine if large samples (per population) are necessary to precisely estimate genetic distances at loci with high levels of polymorphism. These simulat...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800548

    authors: Kalinowski ST

    更新日期:2005-01-01 00:00:00

  • Recent range expansion and agricultural landscape heterogeneity have only minimal effect on the spatial genetic structure of the plant pathogenic fungus Mycosphaerella fijiensis.

    abstract::Understanding how geographical and environmental features affect genetic variation at both the population and individual levels is crucial in biology, especially in the case of pathogens. However, distinguishing between these factors and the effects of historical range expansion on spatial genetic structure remains ch...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2012.55

    authors: Rieux A,De Lapeyre De Bellaire L,Zapater MF,Ravigne V,Carlier J

    更新日期:2013-01-01 00:00:00

  • Modification of atmospheric sand-associated bacterial communities during Asian sandstorms in China and South Korea.

    abstract::The transport of desert soil into the atmosphere during desert sandstorms can affect the Earth's climate and environmental health. Asian desert sandstorms occur almost every year during the Spring, as the atmosphere in the Northern hemisphere warms. It is conceivable that these Asian desert sandstorms may transport mi...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2014.102

    authors: An S,Sin HH,DuBow MS

    更新日期:2015-05-01 00:00:00

  • Genetic hitchhiking and resistance evolution to transgenic Bt toxins: insights from the African stalk borer Busseola fusca (Noctuidae).

    abstract::Since transgenic crops expressing Bacillus thuringiensis (Bt) toxins were first released, resistance evolution leading to failure in control of pests populations has been observed in a number of species. Field resistance of the moth Busseola fusca was acknowledged 8 years after Bt maize was introduced in South Africa....

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2016.104

    authors: Campagne P,Capdevielle-Dulac C,Pasquet R,Cornell SJ,Kruger M,Silvain JF,LeRü B,Van den Berg J

    更新日期:2017-04-01 00:00:00

  • Ecological genomics: understanding gene and genome function in the natural environment.

    abstract::The field of ecological genomics seeks to understand the genetic mechanisms underlying responses of organisms to their natural environments. This is being achieved through the application of functional genomic approaches to identify and characterize genes with ecological and evolutionary relevance. By its very nature,...

    journal_title:Heredity

    pub_type: 杂志文章,评审

    doi:10.1038/sj.hdy.6800992

    authors: Ungerer MC,Johnson LC,Herman MA

    更新日期:2008-02-01 00:00:00

  • Habitat fragmentation differentially shapes neutral and immune gene variation in a tropical bird species.

    abstract::Habitat fragmentation is a major cause of biodiversity loss, responsible for an alteration of intraspecific patterns of neutral genetic diversity and structure. Although neutral genetic variation can be informative for demographic inferences, it may be a poor predictor of adaptive genetic diversity and thus of the con...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-020-00366-w

    authors: Perrin A,Khimoun A,Faivre B,Ollivier A,de Pracontal N,Théron F,Loubon M,Leblond G,Duron O,Garnier S

    更新日期:2021-01-01 00:00:00

  • Genome-wide association study reveals the genetic determinism of growth traits in a Gushi-Anka F2 chicken population.

    abstract::Chicken growth traits are economically important, but the relevant genetic mechanisms have not yet been elucidated. Herein, we performed a genome-wide association study to identify the variants associated with growth traits. In total, 860 chickens from a Gushi-Anka F2 resource population were phenotyped for 68 growth ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-020-00365-x

    authors: Zhang Y,Wang Y,Li Y,Wu J,Wang X,Bian C,Tian Y,Sun G,Han R,Liu X,Jiang R,Wang Y,Li G,Li W,Hu X,Kang X

    更新日期:2020-09-28 00:00:00

  • Genetic structure of a foundation species: scaling community phenotypes from the individual to the region.

    abstract::Understanding the local and regional patterns of species distributions has been a major goal of ecological and evolutionary research. The notion that these patterns can be understood through simple quantitative rules is attractive, but while numerous scaling laws exist (e.g., metabolic, fractals), we are aware of no s...

    journal_title:Heredity

    pub_type: 杂志文章,评审

    doi:10.1038/sj.hdy.6800914

    authors: Bangert RK,Lonsdorf EV,Wimp GM,Shuster SM,Fischer D,Schweitzer JA,Allan GJ,Bailey JK,Whitham TG

    更新日期:2008-02-01 00:00:00

  • Drosophila melanogaster and D. simulans rescue strains produce fit offspring, despite divergent centromere-specific histone alleles.

    abstract::The interaction between rapidly evolving centromere sequences and conserved kinetochore machinery appears to be mediated by centromere-binding proteins. A recent theory proposes that the independent evolution of centromere-binding proteins in isolated populations may be a universal cause of speciation among eukaryotes...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800275

    authors: Sainz A,Wilder JA,Wolf M,Hollocher H

    更新日期:2003-07-01 00:00:00

  • Rearing environment affects the genetic architecture and plasticity of DNA methylation in Chinook salmon.

    abstract::Genetic architecture and phenotypic plasticity are important considerations when studying trait variation within and among populations. Since environmental change can induce shifts in the genetic architecture and plasticity of traits, it is important to consider both genetic and environmental sources of phenotypic var...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-020-0346-4

    authors: Venney CJ,Wellband KW,Heath DD

    更新日期:2021-01-01 00:00:00

  • Genome-wide deleterious mutation favors dispersal and species integrity.

    abstract::Here I develop the idea that ubiquitous harmful genome-wide mutation with local differentiation favors dispersal, even though migration reduces average fitness. Historical contingency of the mutational process means that demes (sub-populations) differentiate from one another. Deleterious or lethal partially recessive ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800143

    authors: Morgan MT

    更新日期:2002-10-01 00:00:00

  • Inversion polymorphisms in Trimerotropis pallidipennis (Orthoptera): clinical variation along an altitudinal gradient.

    abstract::Six populations of Trimerotropis pallidipennis located along an altitudinal gradient in the Antinaco-Los Colorados valley (La Rioja, Argentina), were cytologically analysed. The male karyotype consists of 23 chromosomes (22 + XO) with three long pairs submetacentric, the X-chromosome metacentric and the remaining ones...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1989.14

    authors: Confalonieri VA,Colombo PC

    更新日期:1989-02-01 00:00:00

  • Evolution of the self-incompatibility system in the Brassicaceae: identification of S-locus receptor kinase (SRK) in self-incompatible Capsella grandiflora.

    abstract::Self-incompatibility (SI) has been well studied in the genera Brassica and Arabidopsis, which have become models for investigation into the SI system. To understand the evolution of the SI system in the Brassicaceae, comparative analyses of the S-locus in genera other than Brassica and Arabidopsis are necessary. We re...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800854

    authors: Paetsch M,Mayland-Quellhorst S,Neuffer B

    更新日期:2006-10-01 00:00:00

  • Temporal changes in allele frequency, genetic variation and inbreeding depression in small populations of the guppy, Poecilia reticulata.

    abstract::We established three closed lines of N = 10 for the guppy Poecilia reticulata, to evaluate the relationships among temporal changes in allele frequency, genetic variation and inbreeding depression for a fitness-related trait in small populations. Genetic variation at the allozyme loci, expressed by the proportion of p...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00792.x

    authors: Shikano T,Chiyokubo T,Taniguchi N

    更新日期:2001-02-01 00:00:00

  • Contrasting population structures in two sympatric anurans: implications for species conservation.

    abstract::A general prediction of the neutral theory of evolution is that genetic diversity should correlate positively with effective population size. We show here that diversity across eight microsatellite loci was consistently and substantially lower in one common amphibian (Bufo bufo) than in another with similar life histo...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800391

    authors: Brede EG,Beebee TJ

    更新日期:2004-02-01 00:00:00

  • Wolbachia distribution and cytoplasmic incompatibility based on a survey of 42 spider mite species (Acari: Tetranychidae) in Japan.

    abstract::Wolbachia are a group of maternally inherited bacteria that infect a wide range of arthropods. Wolbachia infections are known to result in the expression of various abnormal reproductive phenotypes, the best known being cytoplasmic incompatibility. The first systematic survey of 42 spider mite species in Japan reveale...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800329

    authors: Gotoh T,Noda H,Hong XY

    更新日期:2003-09-01 00:00:00

  • Rapid, habitat-related evolution of land snail colour morphs on reclaimed land.

    abstract::I made use of the known dates of reclamation (and of afforestations) in the IJsselmeerpolders in The Netherlands to assess evolutionary adaptation in Cepaea nemoralis. At 12 localities (three in each polder), I sampled a total of 4390 adult individuals in paired open and shaded habitats, on average 233 m apart, and sc...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2012.74

    authors: Schilthuizen M

    更新日期:2013-03-01 00:00:00

  • Two-generation analysis of pollen flow across a landscape V: a stepwise approach for extracting factors contributing to pollen structure.

    abstract::Patterns of pollen dispersal are central to both the ecology and evolution of plant populations. However, the mechanisms controlling either the dispersal process itself or our estimation of that process may be influenced by site-specific factors such as local forest structure and nonuniform adult genetic structure. He...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800397

    authors: Dyer RJ,Westfall RD,Sork VL,Smouse PE

    更新日期:2004-03-01 00:00:00

  • Testing the unique amplification event and the worldwide migration hypothesis of insecticide resistance genes with sequence data.

    abstract::In the mosquito Culex pipiens, over-production of esterases is a common insecticide resistance mechanism. Different alleles at the esterase A and B loci are known to occur in natural populations, as shown by enzyme electrophoresis and RFLP studies on the esterase B locus. Here we analyse the variability of the esteras...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1996.181

    authors: Guillemaud T,Rooker S,Pasteur N,Raymond M

    更新日期:1996-11-01 00:00:00

  • A missense mutation in AGTPBP1 was identified in sheep with a lower motor neuron disease.

    abstract::A type of lower motor neuron (LMN) disease inherited as autosomal recessive in Romney sheep was characterized with normal appearance at birth, but with progressive weakness and tetraparesis after the first week of life. Here, we carried out genome-wide homozygosity mapping using Illumina Ovine SNP50 BeadChips on lambs...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2012.23

    authors: Zhao X,Onteru SK,Dittmer KE,Parton K,Blair HT,Rothschild MF,Garrick DJ

    更新日期:2012-09-01 00:00:00

  • pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studies.

    abstract::Multilocus genome-wide association studies (GWAS) have become the state-of-the-art procedure to identify quantitative trait nucleotides (QTNs) associated with complex traits. However, implementation of multilocus model in GWAS is still difficult. In this study, we integrated least angle regression with empirical Bayes...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2017.8

    authors: Zhang J,Feng JY,Ni YL,Wen YJ,Niu Y,Tamba CL,Yue C,Song Q,Zhang YM

    更新日期:2017-06-01 00:00:00

  • Island colonisation and the evolutionary rates of body size in insular neonate snakes.

    abstract::Island colonisation by animal populations is often associated with dramatic shifts in body size. However, little is known about the rates at which these evolutionary shifts occur, under what precise selective pressures and the putative role played by adaptive plasticity on driving such changes. Isolation time played a...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2014.65

    authors: Aubret F

    更新日期:2015-10-01 00:00:00

  • What chance did Mendel's experiments give him of noticing linkage?

    abstract::The a priori probability of noticeable linkage among all conceivable experiments of the size reported by Mendel cannot reasonably be taken as greater than 24-36 per cent; and therefore, the frequently heard opinion that his chances of encountering linkage were high, approaching 99-4 per cent, appears to be mistaken. ...

    journal_title:Heredity

    pub_type: 传,历史文章,杂志文章

    doi:10.1038/hdy.1977.30

    authors: Douglas L,Novitski E

    更新日期:1977-04-01 00:00:00

  • Modelling the co-evolution of indirect genetic effects and inherited variability.

    abstract::When individuals interact, their phenotypes may be affected not only by their own genes but also by genes in their social partners. This phenomenon is known as Indirect Genetic Effects (IGEs). In aquaculture species and some plants, however, competition not only affects trait levels of individuals, but also inflates v...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-018-0068-z

    authors: Marjanovic J,Mulder HA,Rönnegård L,Bijma P

    更新日期:2018-12-01 00:00:00

  • Molecular characterisation of sweet cherry (Prunus avium L.) genotypes using peach [Prunus persica (L.) Batsch] SSR sequences.

    abstract::A total of 76 sweet cherry genotypes were screened with 34 microsatellite primer pairs previously developed in peach. Amplification of SSR loci was obtained for 24 of the microsatellite primer pairs, and 14 of them produced polymorphic amplification patterns. On the basis of polymorphism and quality of amplification, ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800101

    authors: Wünsch A,Hormaza JI

    更新日期:2002-07-01 00:00:00

  • Colonization patterns of the invasive Brazilian peppertree, Schinus terebinthifolius, in Florida.

    abstract::Invasive species are believed to spread through a process of stratified dispersal consisting of short-distance diffusive spread around established foci and human mediated long-distance jumps. Brazilian peppertree (Schinus terebinthifolius), native to South America, was introduced twice as an ornamental plant into Flor...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800936

    authors: Williams DA,Muchugu E,Overholt WA,Cuda JP

    更新日期:2007-05-01 00:00:00

  • The role of ecophysiological models in QTL analysis: the example of specific leaf area in barley

    abstract::Crop modelling has so far contributed little to the genetic analysis of a quantitative trait. This study illustrates how a simple model for crop phenological development, which assumes that crop development rate is affected by daily effective temperature, can assist the identification of Quantitative Trait Loci (QTLs)...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6885030

    authors: Yin X,Kropff MJ,Stam P

    更新日期:1999-04-01 00:00:00

  • Genetic differentiation in four European subspecies of red deer (Cervus elaphus L.).

    abstract::Red deer representing the four different European subspecies Cervus elaphus atlanticus, C. e. elaphus, C. e. germanicus, and C. e. scoticus were examined for allozyme variability at 35 enzyme loci. The proportion of polymorphic loci within populations (P) ranged from 0 to 13.8 per cent and the average heterozygosity (...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1983.71

    authors: Gyllenstein U,Ryman N,Reuterwall C,Dratch P

    更新日期:1983-12-01 00:00:00

  • Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation.

    abstract::Evolve and resequence (E&R) is a new approach to investigate the genomic responses to selection during experimental evolution. By using whole genome sequencing of pools of individuals (Pool-Seq), this method can identify selected variants in controlled and replicable experimental settings. Reviewing the current state ...

    journal_title:Heredity

    pub_type: 杂志文章,评审

    doi:10.1038/hdy.2014.86

    authors: Schlötterer C,Kofler R,Versace E,Tobler R,Franssen SU

    更新日期:2015-05-01 00:00:00