Developmental genes targeted for epigenetic variation between twin-twin transfusion syndrome children.

Abstract:

BACKGROUND:Epigenetic mechanisms are thought to be critical in mediating the role of the intrauterine environment on lifelong health and disease. Twin-twin transfusion syndrome (TTTS) is a rare condition wherein fetuses share the placenta and develop vascular anastomoses, which allow blood to flow between the fetuses. The unequal flow results in reciprocal hypo- and hypervolemia in the affected twins, striking growth differences and physiologic adaptations in response to this significant stressor. The donor twin in the TTTS syndrome can be profoundly growth restricted and there is likely a nutritional imbalance between the twins. The consequences of TTTS on fetal programming are unknown. This condition can now be effectively treated through the use of fetal laparoscopic procedures, but the potential for lifelong morbidity related to this condition during development is apparent. As this condition and the resulting uteroplacental discordance can play a role in the epigenetic process, we sought to investigate the DNA methylation profiles of childhood survivors of TTTS (n = 14). We focused on differences in both global measures and genome-wide CpG specific DNA methylation between donor and recipient children in this pilot study in order to generate hypotheses for further research. RESULTS:We identified significant hypomethylation of the LINE1 repetitive element in the peripheral blood of donor children and subtle variation in the genome-wide profiles of CpG specific methylation most prominent at CpG sites which are targets for polycomb group repressive complexes. CONCLUSIONS:These preliminary results suggest that coordinated epigenetic alterations result from the intrauterine environment experienced by infants with TTTS and may, at least in part, be responsible for downstream health conditions experienced by individuals surviving this condition.

journal_name

Clin Epigenetics

journal_title

Clinical epigenetics

authors

Marsit CJ,Koestler DC,Watson-Smith D,Boney CM,Padbury JF,Luks F

doi

10.1186/1868-7083-5-18

subject

Has Abstract

pub_date

2013-10-03 00:00:00

pages

18

issue

1

eissn

1868-7075

issn

1868-7083

pii

1868-7083-5-18

journal_volume

5

pub_type

杂志文章
  • Exposure and fetal growth-associated miRNA alterations in the human placenta.

    abstract::Researchers have begun to examine epigenetic alterations in the placenta, making key advances in understanding the epigenetic regulatory mechanisms of the placenta that define underlying processes of human development and disease. Examining changes in microRNA (miRNA) expression associated with environmental exposures...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1007/s13148-011-0046-2

    authors: Maccani MA,Marsit CJ

    更新日期:2011-08-01 00:00:00

  • Correction to: DNA methylation signature is prognostic of choroid plexus tumor aggressiveness.

    abstract::After publication of the original article [1], authors have requested to add a 'J' as middle name for Richard Gilbertson. Hence, full name should be Richard J Gilbertson. ...

    journal_title:Clinical epigenetics

    pub_type: 已发布勘误

    doi:10.1186/s13148-019-0737-7

    authors: Pienkowska M,Choufani S,Turinsky AL,Guha T,Merino DM,Novokmet A,Brudno M,Weksberg R,Shlien A,Hawkins C,Bouffet E,Tabori U,Gilbertson RJ,Finlay JL,Jabado N,Thomas C,Sill M,Capper D,Hasselblatt M,Malkin D

    更新日期:2019-10-21 00:00:00

  • Multiomics analyses identified epigenetic modulation of the S100A gene family in Kawasaki disease and their significant involvement in neutrophil transendothelial migration.

    abstract:BACKGROUND:Kawasaki disease (KD) is a prevalent pediatric disease worldwide and can cause coronary artery aneurysm as a severe complication. Typically, DNA methylation is thought to repress the expression of nearby genes. However, the cases in which DNA methylation promotes gene expression have been reported. In additi...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0557-1

    authors: Huang LH,Kuo HC,Pan CT,Lin YS,Huang YH,Li SC

    更新日期:2018-11-01 00:00:00

  • SLCO4C1 promoter methylation is a potential biomarker for prognosis associated with biochemical recurrence-free survival after radical prostatectomy.

    abstract:BACKGROUND:Prostate cancer (PC) is a commonly diagnosed malignancy in males, especially in the western hemisphere. The extensive use of multiple biomarkers plays an important role in the diagnosis and prognosis of PC. However, the accuracy of biomarkers for PC prognosis needs to be urgently improved. This study aimed t...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-019-0693-2

    authors: Li X,Zhang W,Song J,Zhang X,Ran L,He Y

    更新日期:2019-07-09 00:00:00

  • Differences in DNA methylation profile of Th1 and Th2 cytokine genes are associated with tolerance acquisition in children with IgE-mediated cow's milk allergy.

    abstract:BACKGROUND:Epigenetic changes in DNA methylation could regulate the expression of several allergy-related genes. We investigated whether tolerance acquisition in children with immunoglobulin E (IgE)-mediated cow's milk allergy (CMA) is characterized by a specific DNA methylation profile of Th2 (IL-4, IL-5) and Th1 (IL-...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-015-0070-8

    authors: Berni Canani R,Paparo L,Nocerino R,Cosenza L,Pezzella V,Di Costanzo M,Capasso M,Del Monaco V,D'Argenio V,Greco L,Salvatore F

    更新日期:2015-03-31 00:00:00

  • Epigenetic modifications in muscle regeneration and progression of Duchenne muscular dystrophy.

    abstract::Duchenne muscular dystrophy (DMD) is a multisystemic disorder that affects 1:5000 boys. The severity of the phenotype varies dependent on the mutation site in the DMD gene and the resultant dystrophin expression profile. In skeletal muscle, dystrophin loss is associated with the disintegration of myofibers and their i...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章,评审

    doi:10.1186/s13148-021-01001-z

    authors: Rugowska A,Starosta A,Konieczny P

    更新日期:2021-01-19 00:00:00

  • The hyper-activation of transcriptional enhancers in breast cancer.

    abstract:BACKGROUND:Activation of transcription enhancers, especially super-enhancers, is one of the critical epigenetic features of tumorigenesis. However, very few studies have systematically identified the enhancers specific in cancer tissues. METHODS:Here, we studied the change of histone modifications in MMTV-PyVT breast ...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-019-0645-x

    authors: Li QL,Wang DY,Ju LG,Yao J,Gao C,Lei PJ,Li LY,Zhao XL,Wu M

    更新日期:2019-03-12 00:00:00

  • DNA methylation and repressive histones in the promoters of PD-1, CTLA-4, TIM-3, LAG-3, TIGIT, PD-L1, and galectin-9 genes in human colorectal cancer.

    abstract:BACKGROUND:Colorectal cancer (CRC) is the third most commonly diagnosed human malignancy worldwide. Upregulation of inhibitory immune checkpoints by tumor-infiltrating immune cells (TIICs) or their ligands by tumor cells leads to tumor evasion from host immunosurveillance. Changes in DNA methylation pattern and enrichm...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0539-3

    authors: Sasidharan Nair V,Toor SM,Taha RZ,Shaath H,Elkord E

    更新日期:2018-08-06 00:00:00

  • Development of 5' LTR DNA methylation of latent HIV-1 provirus in cell line models and in long-term-infected individuals.

    abstract:BACKGROUND:Human immunodeficiency virus type 1 (HIV-1) latency represents the major barrier to virus eradication in infected individuals because cells harboring latent HIV-1 provirus are not affected by current antiretroviral therapy (ART). We previously demonstrated that DNA methylation of HIV-1 long terminal repeat (...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-016-0185-6

    authors: Trejbalová K,Kovářová D,Blažková J,Machala L,Jilich D,Weber J,Kučerová D,Vencálek O,Hirsch I,Hejnar J

    更新日期:2016-02-19 00:00:00

  • MUC1 is associated with TFF2 methylation in gastric cancer.

    abstract:BACKGROUND:Emerging evidence has shown that MUC1 and TFF2 play crucial roles in the H. pylori-infected pathogenesis of gastric cancer (GC). A recent study revealed that H. pylori infection induced obviously increased Tff2 methylation levels in Muc1-/- mice compared with controls. However, little is known of the molecul...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-020-00832-6

    authors: Ge Y,Ma G,Liu H,Lin Y,Zhang G,Du M,Wang M,Chu H,Zhang H,Zhang Z

    更新日期:2020-03-02 00:00:00

  • Altered DNA methylation is associated with aberrant gene expression in parenchymal but not airway fibroblasts isolated from individuals with COPD.

    abstract:Background:Chronic obstructive pulmonary disease (COPD) is a heterogeneous disease of the lungs that is currently the fourth leading cause of death worldwide. Genetic factors account for only a small amount of COPD risk, but epigenetic mechanisms, including DNA methylation, have the potential to mediate the interaction...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0464-5

    authors: Clifford RL,Fishbane N,Patel J,MacIsaac JL,McEwen LM,Fisher AJ,Brandsma CA,Nair P,Kobor MS,Hackett TL,Knox AJ

    更新日期:2018-03-05 00:00:00

  • Increased epigenetic age in normal breast tissue from luminal breast cancer patients.

    abstract:BACKGROUND:Age is one of the most important risk factors for developing breast cancer. However, age-related changes in normal breast tissue that potentially lead to breast cancer are incompletely understood. Quantifying tissue-level DNA methylation can contribute to understanding these processes. We hypothesized that o...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章,多中心研究

    doi:10.1186/s13148-018-0534-8

    authors: Hofstatter EW,Horvath S,Dalela D,Gupta P,Chagpar AB,Wali VB,Bossuyt V,Storniolo AM,Hatzis C,Patwardhan G,Von Wahlde MK,Butler M,Epstein L,Stavris K,Sturrock T,Au A,Kwei S,Pusztai L

    更新日期:2018-08-29 00:00:00

  • Alterations of adiponectin gene expression and DNA methylation in adipose tissues and blood cells are associated with gestational diabetes and neonatal outcome.

    abstract:BACKGROUND:Adiponectin critically contributes to metabolic homeostasis, especially by insulin-sensitizing action. Gestational diabetes mellitus (GDM) is characterized by insulin resistance leading to materno-fetal hyperglycemia and detrimental birth outcomes. By investigating paired subcutaneous (SAT) and visceral adip...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0567-z

    authors: Ott R,Stupin JH,Melchior K,Schellong K,Ziska T,Dudenhausen JW,Henrich W,Rancourt RC,Plagemann A

    更新日期:2018-10-24 00:00:00

  • DNA methylation modules associate with incident cardiovascular disease and cumulative risk factor exposure.

    abstract:BACKGROUND:Epigenome-wide association studies using DNA methylation have the potential to uncover novel biomarkers and mechanisms of cardiovascular disease (CVD) risk. However, the direction of causation for these associations is not always clear, and investigations to-date have often failed to replicate at the level o...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-019-0705-2

    authors: Westerman K,Sebastiani P,Jacques P,Liu S,DeMeo D,Ordovás JM

    更新日期:2019-10-15 00:00:00

  • Reduced mitochondrial D-loop methylation levels in sporadic amyotrophic lateral sclerosis.

    abstract:BACKGROUND:Mitochondrial dysregulation and aberrant epigenetic mechanisms have been frequently reported in neurodegenerative diseases, including amyotrophic lateral sclerosis (ALS), and several researchers suggested that epigenetic dysregulation in mitochondrial DNA (mtDNA) could contribute to the neurodegenerative pro...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-020-00933-2

    authors: Stoccoro A,Smith AR,Mosca L,Marocchi A,Gerardi F,Lunetta C,Cereda C,Gagliardi S,Lunnon K,Migliore L,Coppedè F

    更新日期:2020-09-11 00:00:00

  • Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels.

    abstract:BACKGROUND:DNA methylation is a well-studied epigenetic mark that is frequently altered in diseases such as cancer, where specific changes are known to reflect the type and severity of the disease. Therefore, there is a growing interest in assessing the clinical utility of DNA methylation as a biomarker for diagnosing ...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-020-00880-y

    authors: Lam D,Luu PL,Song JZ,Qu W,Risbridger GP,Lawrence MG,Lu J,Trau M,Korbie D,Clark SJ,Pidsley R,Stirzaker C

    更新日期:2020-06-22 00:00:00

  • Epigenetic suppression of E-cadherin expression by Snail2 during the metastasis of colorectal cancer.

    abstract:BACKGROUND:The transcription factor Snail2 is a repressor of E-cadherin expression during carcinogenesis; however, the specific mechanisms involved in this process in human colorectal cancer (CRC) remain largely unknown. METHOD:We checked the expression of Snail2 in several clinical CRC specimens. Then, we established...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0592-y

    authors: Hu Y,Dai M,Zheng Y,Wu J,Yu B,Zhang H,Kong W,Wu H,Yu X

    更新日期:2018-12-12 00:00:00

  • H3K4 tri-methylation breadth at transcription start sites impacts the transcriptome of systemic lupus erythematosus.

    abstract:BACKGROUND:The autoimmune disease systemic lupus erythematosus (SLE) has a modified epigenome with modified tri-methylation of histone H3 lysine 4 (H3K4me3) at specific loci across the genome. H3K4me3 is a canonical chromatin mark of active transcription. Recent studies have suggested that H3K4me3 breadth has an import...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-016-0179-4

    authors: Zhang Z,Shi L,Dawany N,Kelsen J,Petri MA,Sullivan KE

    更新日期:2016-02-02 00:00:00

  • DNA methylation and socioeconomic status in a Mexican-American birth cohort.

    abstract:Background:Maternal social environmental stressors during pregnancy are associated with adverse birth and child developmental outcomes, and epigenetics has been proposed as a possible mechanism for such relationships. Methods:In a Mexican-American birth cohort of 241 maternal-infant pairs, cord blood samples were meas...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0494-z

    authors: Coker ES,Gunier R,Huen K,Holland N,Eskenazi B

    更新日期:2018-05-08 00:00:00

  • Endurance training remodels sperm-borne small RNA expression and methylation at neurological gene hotspots.

    abstract::Remodeling of the sperm epigenome by lifestyle factors before conception could account for altered metabolism in the next generation offspring. Here, we hypothesized that endurance training changes the epigenome of human spermatozoa. Using small RNA (sRNA) sequencing and reduced representation bisulfite sequencing (RR...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0446-7

    authors: Ingerslev LR,Donkin I,Fabre O,Versteyhe S,Mechta M,Pattamaprapanont P,Mortensen B,Krarup NT,Barrès R

    更新日期:2018-01-25 00:00:00

  • Epigenetic regulation of AXL and risk of childhood asthma symptoms.

    abstract:Background:AXL is one of the TAM (TYRO3, AXL and MERTK) receptor tyrosine kinases and may affect numerous immune-related health conditions. However, the role for AXL in asthma, including its epigenetic regulation, has not been extensively studied. Methods:We investigated the association between AXL DNA methylation at ...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-017-0421-8

    authors: Gao L,Millstein J,Siegmund KD,Dubeau L,Maguire R,Gilliland FD,Murphy SK,Hoyo C,Breton CV

    更新日期:2017-11-07 00:00:00

  • Analysis of two birth tissues provides new insights into the epigenetic landscape of neonates born preterm.

    abstract:BACKGROUND:Preterm birth (PTB), defined as child birth before completion of 37 weeks of gestation, is a major challenge in perinatal health care and can bear long-term medical and financial burden. Over a million children die each year due to PTB complications, and those who survive can face developmental delays. Unfor...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0599-4

    authors: Wu Y,Lin X,Lim IY,Chen L,Teh AL,MacIsaac JL,Tan KH,Kobor MS,Chong YS,Gluckman PD,Karnani N

    更新日期:2019-02-11 00:00:00

  • Cell-free DNA promoter hypermethylation in plasma as a diagnostic marker for pancreatic adenocarcinoma.

    abstract:BACKGROUND:Pancreatic cancer has a 5-year survival rate of only 5-7%. Difficulties in detecting pancreatic cancer at early stages results in the high mortality and substantiates the need for additional diagnostic tools. Surgery is the only curative treatment and unfortunately only possible in localized tumours. A diagn...

    journal_title:Clinical epigenetics

    pub_type: 临床试验,杂志文章

    doi:10.1186/s13148-016-0286-2

    authors: Henriksen SD,Madsen PH,Larsen AC,Johansen MB,Drewes AM,Pedersen IS,Krarup H,Thorlacius-Ussing O

    更新日期:2016-11-16 00:00:00

  • DNA methylation signature of interleukin 1 receptor type II in asthma.

    abstract::Interleukin 1 and its receptors are associated with allergic diseases such as asthma. In the present study, we measured DNA methylation at the IL1R1 and IL1R2 gene loci and assessed for associations with asthma-related phenotypes and gene expressions. We found that asthmatic and atopic individuals have higher IL1R2 pr...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-015-0114-0

    authors: Gagné-Ouellet V,Guay SP,Boucher-Lafleur AM,Bouchard L,Laprise C

    更新日期:2015-08-05 00:00:00

  • Identification and validation of SRY-box containing gene family member SOX30 methylation as a prognostic and predictive biomarker in myeloid malignancies.

    abstract:Background:Methylation-associated SOX family genes have been proved to be involved in multiple essential processes during carcinogenesis and act as potential biomarkers for cancer diagnosis, staging, prediction of prognosis, and monitoring of response to therapy. Herein, we revealed SOX30 methylation and its clinical i...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0523-y

    authors: Zhou JD,Wang YX,Zhang TJ,Li XX,Gu Y,Zhang W,Ma JC,Lin J,Qian J

    更新日期:2018-07-05 00:00:00

  • Vitamin D status and epigenetic-based mortality risk score: strong independent and joint prediction of all-cause mortality in a population-based cohort study.

    abstract:Background:Vitamin D deficiency and insufficiency have been established to be strongly associated with increased overall mortality and deaths from specific aging-related diseases. Recently, an epigenetic "mortality risk score" (MS) based on whole blood DNA methylation at the 10 most prominent mortality-related cytosine...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-018-0515-y

    authors: Gao X,Zhang Y,Schöttker B,Brenner H

    更新日期:2018-06-20 00:00:00

  • Maternal B vitamins: effects on offspring weight and DNA methylation at genomically imprinted domains.

    abstract:BACKGROUND:Inadequate maternal nutrition during early fetal development can create permanent alterations in the offspring, leading to poor health outcomes. While nutrients involved in one-carbon cycle metabolism are important to fetal growth, associations with specific nutrients remain inconsistent. This study estimate...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-016-0174-9

    authors: McCullough LE,Miller EE,Mendez MA,Murtha AP,Murphy SK,Hoyo C

    更新日期:2016-01-22 00:00:00

  • MicroRNA-375 plays a dual role in prostate carcinogenesis.

    abstract:BACKGROUND:Prostate cancer (PCa), a highly incident and heterogeneous malignancy, mostly affects men from developed countries. Increased knowledge of the biological mechanisms underlying PCa onset and progression are critical for improved clinical management. MicroRNAs (miRNAs) deregulation is common in human cancers, ...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-015-0076-2

    authors: Costa-Pinheiro P,Ramalho-Carvalho J,Vieira FQ,Torres-Ferreira J,Oliveira J,Gonçalves CS,Costa BM,Henrique R,Jerónimo C

    更新日期:2015-04-10 00:00:00

  • Apabetalone (RVX-208) reduces vascular inflammation in vitro and in CVD patients by a BET-dependent epigenetic mechanism.

    abstract:BACKGROUND:Apabetalone (RVX-208) is a bromodomain and extraterminal protein inhibitor (BETi) that in phase II trials reduced the relative risk (RR) of major adverse cardiac events (MACE) in patients with cardiovascular disease (CVD) by 44% and in diabetic CVD patients by 57% on top of statins. A phase III trial, BETonM...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-019-0696-z

    authors: Tsujikawa LM,Fu L,Das S,Halliday C,Rakai BD,Stotz SC,Sarsons CD,Gilham D,Daze E,Wasiak S,Studer D,Rinker KD,Sweeney M,Johansson JO,Wong NCW,Kulikowski E

    更新日期:2019-07-12 00:00:00

  • RRx-001, an epigenetic-based radio- and chemosensitizer, has vascular normalizing effects on SCCVII and U87 tumors.

    abstract:BACKGROUND:The tumor-specific microregional effects of the anticancer agent RRx-001, a novel epigenetic-based radio/chemosensitizer with nitrogen oxide-donating properties in phase II clinical trials, were investigated with whole tissue section quantitative immunohistological staining in mouse SCCVII and human U87 tumo...

    journal_title:Clinical epigenetics

    pub_type: 杂志文章

    doi:10.1186/s13148-016-0220-7

    authors: Oronsky B,Scicinski J,Cabrales P,Minchinton A

    更新日期:2016-05-11 00:00:00